菌絲(英文:hypha,複數hyphae)係絲狀真菌(英文:filamentous fungus)或稱黴菌(英文:mold)入面一種長、支鏈絲狀結構,佢係大多數真菌嘅結構單位,而部分原核生物例如放線菌同樣有菌絲。喺大多數真菌入面,菌絲係營養生長嘅主要模式。酵母係單細胞真菌,唔會成長為菌絲。
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