Lanak
- (1876). Manual of the Vertebrates of the Northern United States.
- (1877). Contributions to North American Ichthyology.
- (1882). Synopsis of the Fishes of North America.
- (1885). A Catalogue of the Fishes Known to Inhabit the Waters of North America.
- (1887). Science Sketches.
- (1888). The Value of Higher Education.
- (1895). The Factors in Organic Evolution.
- (1895). The Fishes of Puget Sound.
- (1895). The Fishes of Sinaloa.
- (1895). The Story of the Innumerable Company.
- (1896). The Care and Culture of Men.
- (1896–1900). The Fishes of North and Middle America [lau boluen]
- (1897). Matka and Kotik.
- (1898). The Fur Seals and Fur-Seal Islands of the North Pacific Ocean.
- (1898). Footnotes to Evolution.
- (1899). The Book of Knight and Barbara.
- (1899). California and the Californians.
- (1899). Imperial Democracy.
- (1899). The Question of the Philippines.
- (1899). The True Basis of Economics [with J.H. Stallard].
- (1900). Animal Life: A First Book of Zoology [[[Vernon Lyman Kellogg|Vernon L. Kellogekin]]].
- (1900). The Strength of Being Morally Clean.
- (1902). American Food and Game Fishes [[[Barton Warren Evermann|B. W. Evermannekin]]]
- (1902). Animal Forms: A Text-Book of Zoology.
- (1902). The Blood of the Nation [1910, expanded].
- (1902). The Philosophy of Despair.
- (1903). Animal Studies [[[Vernon Lyman Kellogg|Vernon L. Kellog]] eta Harold Heathekin].
- (1903). The Training of a Physician.
- (1903). The Voice of the Scholar.
- (1904). The Wandering Host.
- (1905). The Aquatic Resources of the Hawaiian Islands.
- (1905). A Guide to the Study of Fishes.
- (1905). The Fish Fauna of the Tortugas Archipelago [Dr. Joseph Cheesman Thompsonekin].
- (1906). The Fishes of Samoa.
- (1906). Life's Enthusiasms.
- (1907). The Alps of King-Kern Divide.
- (1907). The California Earthquake of 1906.
- (1907). College and the Man.
- (1907). Evolution and Animal Life [[[Vernon Lyman Kellogg|Vernon L. Kellogekin]]].
- (1907). Fishes.
- (1907). Fishes of the Islands of Luzon and Panay.
- (1907). The Human Harvest.
- (1908). Description of Three New Species of Carangoid Fishes from Formosa.
- (1908). The Fate of Iciodorum.
- (1908). Fish Stories: Alleged and Experienced.
- (1908). The Higher Sacrifice.
- (1908). The Scientific Aspects of Luther Burbank's Work [[[Vernon Lyman Kellogg|Vernon L. Kellogekin]]].
- (1909). A Catalog of the Fishes of Formosa.
- (1909). The Religion of a Sensible American.
- (1910). The Call of the Nation.
- (1910). Check-List of Species of Fishes Known from the Philippine Archipelago [Robert Earl Richardsonekin].
- (1910). Leading American Men of Science.
- (1910). The Woman and the University.
- (1910). Work of the International Fisheries Commission of Great Britain and the United States.
- (1911). The Heredity of Richard Roe.
- (1911). The Stability of Truth.
- (1912). The Practical Education.
- (1912). The Story of a Good Woman: Jane Lathrop Stanford.
- (1912). Syllabus of Lectures on International Conciliation.
- (1912). Unseen Empire.
- (1913). America's Conquest of Europe.
- (1913). A Catalog of the Fishes Known from the Waters of Korea.
- (1913). Naval Waste.
- (1913). War and Waste.
- (1913). What Shall We Say?
- (1914). Record of Fishes Obtained in Japan in 1911.
- (1914). War's Aftermath [Harvey Ernest Jordanekin].
- (1915). The Foundation Ideals of Stanford University.
- (1915). War and the Breed.
- (1916). Ways to Lasting Peace.
- (1916). What of Mexico?
- (1916). World Peace and the College Man.
- (1917). The Genera of Fishes.
- (1918). Democracy and World Relations.
- (1919). Fossil Fishes of Southern California.
- (1919). Studies in Ichthyology [[[Carl Leavitt Hubbs]]ekin].
- (1920). Fossil Fishes of Diatom Beds of Lompoc, California.
- (1922). Days of a Man [autobiografia].
- (1922). A List of the Fishes of Hawaii.
- (1927). A Higher Foolishness.
- (1929). Your Family Tree.
Artikulu hautatuak
- (1893). "The Educational Ideas of Leland Stanford," Educational Review 6, pp. 136–143.
- (1902). "Certain Problems of Democracy in Hawaii," Out West 16, pp. 25, 239.
- (1906). "The Trout and Salmon of the Pacific Coast," The Pacific Monthly 15, pp. 379–389.
- (1906). "Pelagic Sealing and the Fur Seal Herd," The Pacific Monthly 15, No. 6, pp. 517–522 [with George A. Clark].
- (1906). "Stanford University and the Earthquake of April 18, 1906," The Pacific Monthly 15, No. 6, pp. 635–646.
- (1907). "The Present Status of Darwinism," The Dial, Vol XLIII, July/December, pp. 161–163.
- (1913). "The Interlocking Directorates of War," The World's Work 26, pp. 277–279.
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