automated Taxobox

require('Module:No globals') local TaxonItalics = require('Module:TaxonItalics') local Autotaxobox = require('Module:Autotaxobox') local ItalicTitle = require('Module:Italic title') local p = {} -- functions made public local l = {} -- nonpublic internal functions and variables global to the module l.system = '' -- '' for normal scientific classification (default)               -- 'ichnos' for trace fossil classification               -- 'veterovata' for egg fossil classification  -- ============================================================================= -- ichnobox implements Template:Ichnobox; see the documentation of that -- template for details. -- The only difference from Template:Automatic taxobox is in the taxobox colour -- and classification link and the parameters for type species and genera. -- =============================================================================  function p.ichnobox(frame) l.system = 'ichnos' return p.automaticTaxobox(frame) end  -- ============================================================================= -- oobox implements Template:Oobox; see the documentation of that -- template for details. -- The only difference from Template:Automatic taxobox is in the taxobox colour -- and classification link and the parameters for type species and genera. -- =============================================================================  function p.oobox(frame) l.system = 'veterovata' return p.automaticTaxobox(frame) end  -- ============================================================================= -- automaticTaxobox implements Template:Automatic taxobox; see the documentation -- of that template for details. -- It also implements Template:Ichnobox and Template:Oobox. The small -- differences are signalled by the module-wide variable l.system. -- The following parameters present in the old template code version of -- Template:Automatic taxobox were not used and have not been implemented: --   image_caption_align --   image2_caption_align --   binomial2 --   binomial2_authority --   binomial3 --   binomial3_authority --   binomial4 --   binomial4_authority -- =============================================================================  function p.automaticTaxobox(frame) local args if frame.args['direct'] == 'yes' then args = frame.args else args = frame:getParent().args end local res = '' -- --------------------------------------------------------------------- -- pick up taxobox parameters from the caller that need to be processed; -- most will be passed on unchanged -- --------------------------------------------------------------------- local pagename = args['pagename'] or '' -- for testing and debugging only local italicTitle = args['italic_title'] or args['italic title'] or '' local ichnos = '' if l.system == 'ichnos' then ichnos = 'true' end local veterovata = '' if l.system == 'veterovata' then veterovata = 'true' end local fossilRange = args['fossil_range'] or args['fossil range'] or args['temporal_range'] or args['temporal range'] or ''     local oldestFossil = args['oldest_fossil'] or args['oldest fossil'] or ''     local youngestFossil =  args['youngest_fossil'] or args['youngest fossil'] or '' local name = args['name'] or '' local colourAs = args['color_as'] or args['color as'] or args['colour_as']  or args['colour as'] or '' local taxon = args['taxon'] or '' local authority = args['authority'] or ''     local parentAuthority = args['parent_authority'] or args['parent authority'] or '' local subdivision = args['subdivision'] or '' local subdivisionRef = args['subdivision_ref'] or args['subdivision ref'] or '' local subdivisionRanks = args['subdivision_ranks'] or args['subdivision ranks'] or '' local manualFlag = 'text' -- marks manually specified ranks local binomial = args['binomial'] or args['binomial_'..manualFlag] or args['binomial '..manualFlag] or '' local binomialAuthority = args['binomial_authority'] or args['binomial authority'] or '' local genusManual = args['genus_'..manualFlag] or args['genus '..manualFlag] or'' local speciesManual = args['species_'..manualFlag] or args['species '..manualFlag] or'' -- ------------------------------------------------------ -- set the taxobox parameters determined by this function -- ------------------------------------------------------     fossilRange = l.setfossilRange(frame, fossilRange, oldestFossil, youngestFossil) -- use the base page name as the taxon if the taxon parameter is missing local currentPagename = mw.title.getCurrentTitle() if pagename == '' then pagename = currentPagename.text end -- pagename para only used in testing and  local basePagename = pagename if italicTitle ~= 'taxon' then basePagename = mw.ustring.gsub(basePagename, '%s+%b()$', '', 1) end local taxonParaMissingError = false if taxon == '' then taxonParaMissingError = true taxon = basePagename end -- decide if the page name and taxobox name need to be italicized; -- if italic_title is not set, then if the names are the taxon, use its rank to decide local ok, taxonRank = Autotaxobox.getTaxonInfoItem(frame, taxon, 'rank') -- taxonRank needed later if not here if italicTitle == '' then if not (ok and taxonRank ~= '' and     frame:expandTemplate{ title = 'Is italic taxon', args = {taxonRank} } == 'yes') then italicTitle = 'no' end end --   remove any " (DISAMBIG)" or "/MODIFIER" from the taxon's name; --   if the base page name is the same as the base taxon name, then italicization can be applied local baseTaxon = taxon if italicTitle ~= 'taxon' then baseTaxon = mw.ustring.gsub(baseTaxon, '%s+%b()$', '', 1) end baseTaxon = mw.ustring.gsub(baseTaxon, '/.*$', '', 1) if italicTitle == '' and basePagename == baseTaxon then italicTitle = 'yes' end -- italicize the page name (page title) if required if currentPagename.namespace == 0 and (italicTitle == 'yes' or italicTitle == 'taxon') then if italicTitle == 'taxon' or TaxonItalics.hasConnectingTerm(baseTaxon) then res =  res .. frame:expandTemplate{ title = 'Italic taxon title', args = {} } italicTitle = 'yes' else ItalicTitle._main({}) end end -- set the taxobox name if not supplied, italicizing it if appropriate. if name == '' then name = basePagename if italicTitle == 'yes' then name = TaxonItalics.italicizeTaxonName(name, false, false) end -- name = name ..  '/' .. baseTaxon .. '/' .. nameRank end -- determine taxobox colour local colour = '' if colourAs ~= '' then colour = frame:expandTemplate{ title = 'Taxobox colour', args = {colourAs} } elseif l.system == 'ichnos' then colour = frame:expandTemplate{ title = 'Taxobox colour', args = {'Ichnos'} } elseif l.system == 'veterovata' then colour = frame:expandTemplate{ title = 'Taxobox colour', args = {'Veterovata'} } else colour = Autotaxobox.getTaxoboxColour(frame, taxon) end -- fill in a missing subdivision_ranks parameter if subdivision ~= '' and subdivisionRanks == '' and ok and taxonRank ~= '' then subdivisionRanks =  frame:expandTemplate{ title = 'Children rank', args = {taxonRank} } end -- set binomial parameters if the target taxon is (unusually) a species local genusAuthority = '' if binomial == '' then if ok and taxonRank == 'species' then binomial = TaxonItalics.italicizeTaxonName(taxon, false, false) binomialAuthority = authority end end -- handle any manually set ranks local boldFirst = '' local offset = 0 if speciesManual ~= '' then offset = offset + 1 binomialAuthority = authority if binomial == '' then binomial = '' end end if genusManual ~= '' then boldFirst = 'link' offset = offset + 1 if offset == 1 then genusAuthority = authority else genusAuthority = parentAuthority end end -- process type genus and type species if present; italicize if they seem not to have an authority attached local typeGenus = '' local typeGenusAuthority = '' local typeSpecies = '' local typeSpeciesAuthority = '' local typeIchnogenus = '' local typeIchnogenusAuthority = '' local typeIchnospecies = '' local typeIchnospeciesAuthority = '' local typeOogenus = '' local typeOogenusAuthority = '' local typeOospecies = '' local typeOospeciesAuthority = '' if l.system == '' then typeGenus = l.italicizeTypeName(args['type_genus'] or args['type genus'] or '') typeGenusAuthority = args['type_genus_authority'] or args['type genus authority'] or '' typeSpecies = l.italicizeTypeName(args['type_species'] or args['type species'] or '') typeSpeciesAuthority = args['type_species_authority'] or args['type species authority'] or '' elseif l.system == 'ichnos' then typeIchnogenus = l.italicizeTypeName(args['type_ichnogenus'] or args['type ichnogenus'] or '') typeIchnogenusAuthority = args['type_ichnogenus_authority'] or args['type ichnogenus authority'] or '' typeIchnospecies = l.italicizeTypeName(args['type_ichnospecies'] or args['type ichnospecies'] or '') typeIchnospeciesAuthority = args['type_ichnospecies_authority'] or args['type ichnospecies authority'] or '' elseif l.system == 'veterovata' then typeOogenus = l.italicizeTypeName(args['type_oogenus'] or args['type oogenus'] or '') typeOogenusAuthority = args['type_oogenus_authority'] or args['type oogenus authority'] or '' typeOospecies = l.italicizeTypeName(args['type_oospecies'] or args['type oospecies'] or '') typeOospeciesAuthority = args['type_oospecies_authority'] or args['type oospecies authority'] or '' end -- ------------------------------------------------ -- now call Taxobox/core with all of its parameters -- ------------------------------------------------ res = res .. frame:expandTemplate{ title = 'Taxobox/core', args = { ichnos = ichnos,   veterovata = veterovata,   ['edit link'] = 'e',   temporal_range = fossilRange,   display_taxa = args['display_parents'] or args['display parents'] or '1',   parent = taxon,   authority = authority,           parent_authority = parentAuthority,   grandparent_authority = args['grandparent_authority'] or args['grandparent authority'] or '',   greatgrandparent_authority = args['greatgrandparent_authority'] or args['greatgrandparent authority'] or '',   greatgreatgrandparent_authority = args['greatgreatgrandparent_authority'] or args['greatgreatgrandparent authority'] or '',   name = name,   colour = colour,   status = args['status'] or '',   status_system = args['status_system'] or args['status system'] or '',   status_ref = args['status_ref'] or args['status ref'] or '',   status2 = args['status2'] or '',   status2_system = args['status2_system'] or args['status2 system'] or '',   status2_ref = args['status2_ref'] or args['status2 ref'] or '',   trend = args['trend'] or '',   extinct = args['extinct'] or '',   image = args['image'] or '',   upright = args['image_upright'] or args['image upright'] or '',   image_alt = args['image_alt'] or args['image alt'] or '',   image_caption = args['image_caption'] or args['image caption'] or '',   image2 = args['image2'] or '',   upright2 = args['image2_upright'] or args['image2 upright'] or '',   image2_alt = args['image2_alt'] or args['image2 alt'] or '',   image2_caption = args['image2_caption'] or args['image2 caption'] or '',   classification_status = args['classification_status'] or args['classification status'] or '',   diversity = args['diversity'] or '',   diversity_ref = args['diversity_ref'] or args['diversity ref'] or '',   diversity_link = args['diversity_link'] or args['diversity link'] or '',   bold_first = boldFirst,   offset = offset,   genus = genusManual,   genus_authority = genusAuthority,   species = speciesManual,   binomial = binomial,   binomial_authority = binomialAuthority,   trinomial = args['trinomial'] or '',   trinomial_authority = args['trinomial_authority'] or args['trinomial authority'] or '',   type_genus = typeGenus,   type_genus_authority = typeGenusAuthority,   type_species = typeSpecies,   type_species_authority = typeSpeciesAuthority,   type_ichnogenus = typeIchnogenus,   type_ichnogenus_authority = typeIchnogenusAuthority,   type_ichnospecies = typeIchnospecies,   type_ichnospecies_authority = typeIchnospeciesAuthority,   type_oogenus = typeOogenus,   type_oogenus_authority = typeOogenusAuthority,   type_oospecies = typeOospecies,   type_oospecies_authority = typeOospeciesAuthority,   subdivision = subdivision,   subdivision_ref = subdivisionRef,   subdivision_ranks = subdivisionRanks,     type_strain = args['type_strain'] or args['type strain'] or '',   type_strain_ref = args['type_strain_ref'] or args['type strain ref'] or '',   range_map = args['range_map'] or args['range map'] or '',   range_map_upright = args['range_map_upright'] or args['range map upright'] or '',   range_map_alt = args['range_map_alt'] or args['range map alt'] or '',   range_map_caption = args['range_map_caption'] or args['range map caption'] or '',   range_map2 = args['range_map2'] or args['range map2'] or '',   range_map2_upright = args['range_map2_upright'] or args['range map2 upright'] or '',   range_map2_alt = args['range_map2_alt'] or args['range map2 alt'] or '',   range_map2_caption = args['range_map2_caption'] or args['range map2 caption'] or '',   range_map3 = args['range_map3'] or args['range map3'] or '',   range_map3_upright = args['range_map3_upright'] or args['range map3 upright'] or '',   range_map3_alt = args['range_map3_alt'] or args['range map3 alt'] or '',   range_map3_caption = args['range_map3_caption'] or args['range map3 caption'] or '',   range_map4 = args['range_map4'] or args['range map4'] or '',   range_map4_upright = args['range_map4_upright'] or args['range map4 upright'] or '',   range_map4_alt = args['range_map4_alt'] or args['range map4 alt'] or '',   range_map4_caption = args['range_map4_caption'] or args['range map4 caption'] or '',   synonyms_ref = args['synonyms_ref'] or args['synonyms ref'] or '',   synonyms = args['synonyms'] or '' } } -- put page in error-tracking categories if required local errCat1 = '' if genusManual ~= '' or speciesManual ~= '' or binomial ~= '' then errCat1 = '[[Category:Automatic taxoboxes using manual parameters]]' end local errCat2 = '' if taxonParaMissingError then errCat2 = '[[Category:Automatic taxoboxes relying on page title]]' end res = res .. frame:expandTemplate{ title = 'Main other', args = {errCat1..errCat2} } return res end  -- ============================================================================= -- l.setfossilRange(frame, fossilRange, oldestFossil, youngestFossil) checks -- the parameters that determine the fossil range, returning an appropriate -- range. -- ============================================================================= -- temporary public function for debugging function p.chkFossilRange(frame) local args = frame.args local fossilRange = args['temporal_range'] or args['temporal range'] or args['fossil_range'] or args['fossil range'] or ''     local oldestFossil = args['oldest_fossil'] or args['oldest fossil'] or ''     local youngestFossil =  args['youngest_fossil'] or args['youngest fossil'] or ''     local fossilRange = l.setfossilRange(frame, fossilRange, oldestFossil, youngestFossil) return fossilRange end  function l.setfossilRange(frame, fossilRange, oldestFossil, youngestFossil) local res = '' if fossilRange ~= '' then if mw.ustring.find(frame:expandTemplate{ title = 'Period start', args = { fossilRange } }, '[Ee]rror') then res = fossilRange else  res = frame:expandTemplate{ title = 'Geological range', args = { fossilRange } } end elseif oldestFossil ~= '' then if youngestFossil == '' then youngestFossil = 'Recent' end if mw.ustring.find(frame:expandTemplate{ title = 'Period start', args = { oldestFossil } }, '[Ee]rror') or    mw.ustring.find(frame:expandTemplate{ title = 'Period start', args = { youngestFossil } }, '[Ee]rror') then res = oldestFossil..'–'..youngestFossil else res = frame:expandTemplate{ title = 'Geological range', args = { oldestFossil, youngestFossil } } end end return res end  -- ============================================================================= -- l.italicizeTypeName(typeName) checks whether the name of a type genus or -- species should be italicized, because it appears to be a bare name. -- =============================================================================  function l.italicizeTypeName(typeName) if typeName and not (string.find(typeName, "<", 1, true) or string.find(typeName, ">", 1, true)) then typeName = TaxonItalics.italicizeTaxonName(typeName, false, false) end return typeName end  -- **************************** Speciesbox support *****************************  -- ============================================================================= -- l.genusOf(str) extracts the genus from a string. Normally this will be the -- first word of the string (e.g. given 'Bellis perennis' it returns 'Bellis'). -- It also handles a string containing a nothogenus with a spaced × (e.g. given -- '× Heucherella tiarelloides' it returns '× Heucherella'). -- =============================================================================  function l.genusOf(str) local res = mw.ustring.match(str, '^[^%s]*', 1) if res == mw.ustring.char(215) then res = res .. ' ' .. mw.ustring.match(str, '^[^%s]*', 3) end return res end  -- ============================================================================= -- l.doSpeciesboxName(name, taxon, genus, species, basePageTitle, italicTitle) -- returns a name for a taxobox created by Template:Speciesbox. The name will be -- italicized if appropriate. It also generates code to italicize the page title -- if appropropriate. In both cases the test for italicization is that the base -- taxon name (stripped of any disambiguation or qualifier) is the same as the -- base page title. -- =============================================================================  function p.speciesboxName(frame) local name = frame.args[1] or '' local taxon = frame.args[2] or '' local genus = frame.args[3] or '' local species = frame.args[4] or '' local basePageTitle = frame.args[5] or '' local italicTitle = frame.args[6] or '' return l.doSpeciesboxName(name, taxon, genus, species, basePageTitle, italicTitle) end  function l.doSpeciesboxName(name, taxon, genus, species, basePageTitle, italicTitle) if taxon ~= '' then genus = mw.ustring.gsub(l.genusOf(taxon), '/.*$', '', 1) -- strip any qualifier else genus = mw.ustring.gsub(mw.ustring.gsub(genus, '%s+%b()$', '', 1), '/.*$', '', 1) -- strip any disambig and qualifier if species == '' then taxon = genus else taxon = genus .. ' ' .. species end end local italicizeP = italicTitle ~= 'no' and (basePageTitle == taxon or basePageTitle == genus) -- use basePageTitle to match taxon/genus -- deal with taxobox name (i.e. its caption) if name == '' then name = basePageTitle if italicizeP then name = TaxonItalics.italicizeTaxonName(name, false, false) end end -- deal with page title if italicizeP then local pageTitle = mw.title.getCurrentTitle().text -- formatting the page title with DISPLAYTITLE needs the full page title if italicTitle ~= 'test' then  pageTitle  = TaxonItalics.italicizeTaxonName(pageTitle, false, false, true) -- format pageTitle, not italicizing any parenthesized term local nsText = mw.title.getCurrentTitle().nsText -- for drafts and other pages not in mainspace if nsText ~= '' then pageTitle = nsText .. ':' .. pageTitle end mw.getCurrentFrame():callParserFunction('DISPLAYTITLE', pageTitle) else name = name .. ' \\Italic title\\ ' .. pageTitle -- for testing and debugging end end return name end  -- ============================================================================= -- ============================================================================= function p.infraspeciesboxName(frame) local name = frame.args[1] or '' local genus = frame.args[2] or '' local species = frame.args[3] or '' local ct = frame.args[4] or ''     local infraspecies = frame.args[5] or '' local basePageTitle = frame.args[6] or '' local italicTitle = frame.args[7] or '' return l.doinfraspeciesboxName(name, genus, species, ct, infraspecies, basePageTitle, italicTitle) end  function l.doinfraspeciesboxName(name, genus, species, ct, infraspecies, basePageTitle, italicTitle) genus = mw.ustring.gsub(mw.ustring.gsub(genus, '%s+%b()$', '', 1), '/.*$', '', 1) -- strip any disambig and qualifier local taxon = genus .. ' ' .. species if ct == '' then taxon = taxon .. ' ' .. infraspecies else taxon = taxon .. ' ' .. ct .. ' ' .. infraspecies end local italicizeP = italicTitle ~= 'no' and (basePageTitle == taxon) -- use basePageTitle to match taxon -- deal with taxobox name (i.e. its caption) if name == '' then name = basePageTitle if italicizeP then name = TaxonItalics.italicizeTaxonName(name, false, false) end end -- deal with page title if italicizeP then local pageTitle = mw.title.getCurrentTitle().text -- formatting the page title with DISPLAYTITLE needs the full page title pageTitle  = TaxonItalics.italicizeTaxonName(pageTitle, false, false, true) -- format pageTitle, not italicizing any parenthesized term if italicTitle ~= 'test' then  mw.getCurrentFrame():callParserFunction('DISPLAYTITLE', pageTitle) else name = name .. ' \\Italic title\\ ' .. pageTitle -- for testing and debugging end end return name end  return p